Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
MSH4O15457 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
MSH4O15457 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.01□□□□□ -1.61
MSH4O15457 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
MSH4O15457 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.01□□□□□ -1.61
MSH4O15457 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
MSH4O15457 FAM3C2-201ENST00000312214 681 ntBASIC5.01□□□□□ -1.61
MSH4O15457 SNORD96B-201ENST00000386148 79 ntBASIC5.01□□□□□ -1.61
MSH4O15457 AL034379.1-201ENST00000423216 253 ntBASIC5.01□□□□□ -1.61
MSH4O15457 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.01□□□□□ -1.61
MSH4O15457 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.01□□□□□ -1.61
MSH4O15457 MTND4LP12-201ENST00000448237 295 ntBASIC5.01□□□□□ -1.61
MSH4O15457 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.01□□□□□ -1.61
MSH4O15457 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.01□□□□□ -1.61
MSH4O15457 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.01□□□□□ -1.61
MSH4O15457 AC015795.1-201ENST00000513669 327 ntBASIC5.01□□□□□ -1.61
MSH4O15457 AC010476.1-201ENST00000519111 851 ntBASIC5.01□□□□□ -1.61
MSH4O15457 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.01□□□□□ -1.61
MSH4O15457 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.01□□□□□ -1.61
MSH4O15457 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MSH4O15457 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.01□□□□□ -1.61
MSH4O15457 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.01□□□□□ -1.61
MSH4O15457 AC093591.2-201ENST00000565254 3843 ntBASIC5.01□□□□□ -1.61
MSH4O15457 MIR4284-201ENST00000578924 81 ntBASIC5.01□□□□□ -1.61
MSH4O15457 ELOCP28-201ENST00000590044 317 ntBASIC5.01□□□□□ -1.61
MSH4O15457 AC005086.4-201ENST00000623065 213 ntBASIC5.01□□□□□ -1.61
MSH4O15457 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.01□□□□□ -1.61
MSH4O15457 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MSH4O15457 MTCO1P7-201ENST00000419523 1542 ntBASIC5.01□□□□□ -1.61
MSH4O15457 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.01□□□□□ -1.61
MSH4O15457 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
MSH4O15457 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
MSH4O15457 TCP1P3-201ENST00000414406 1498 ntBASIC5□□□□□ -1.61
MSH4O15457 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5□□□□□ -1.61
MSH4O15457 THAP12P8-201ENST00000447914 2115 ntBASIC5□□□□□ -1.61
MSH4O15457 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5□□□□□ -1.61
MSH4O15457 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
MSH4O15457 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
MSH4O15457 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
MSH4O15457 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
MSH4O15457 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
MSH4O15457 OR5P1P-201ENST00000299512 925 ntBASIC5□□□□□ -1.61
MSH4O15457 MIR3065-201ENST00000390137 79 ntBASIC5□□□□□ -1.61
MSH4O15457 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5□□□□□ -1.61
MSH4O15457 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5□□□□□ -1.61
MSH4O15457 AC023141.6-201ENST00000429418 337 ntBASIC5□□□□□ -1.61
MSH4O15457 CDY14P-201ENST00000431260 1014 ntBASIC5□□□□□ -1.61
MSH4O15457 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5□□□□□ -1.61
MSH4O15457 CDY12P-201ENST00000440679 1015 ntBASIC5□□□□□ -1.61
MSH4O15457 CDY13P-201ENST00000445813 1015 ntBASIC5□□□□□ -1.61
MSH4O15457 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5□□□□□ -1.61
MSH4O15457 CDY23P-201ENST00000451661 1014 ntBASIC5□□□□□ -1.61
MSH4O15457 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5□□□□□ -1.61
MSH4O15457 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5□□□□□ -1.61
MSH4O15457 MTCYBP14-201ENST00000457471 715 ntBASIC5□□□□□ -1.61
MSH4O15457 RN7SL98P-201ENST00000462271 300 ntBASIC5□□□□□ -1.61
MSH4O15457 ATP5G1P3-201ENST00000463301 410 ntBASIC5□□□□□ -1.61
MSH4O15457 CREM-220ENST00000463314 964 ntTSL 2 BASIC5□□□□□ -1.61
MSH4O15457 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5□□□□□ -1.61
MSH4O15457 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5□□□□□ -1.61
MSH4O15457 CEACAMP10-202ENST00000495431 496 ntBASIC5□□□□□ -1.61
MSH4O15457 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5□□□□□ -1.61
MSH4O15457 RNA5SP497-201ENST00000516081 97 ntBASIC5□□□□□ -1.61
MSH4O15457 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5□□□□□ -1.61
MSH4O15457 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5□□□□□ -1.61
MSH4O15457 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5□□□□□ -1.61
MSH4O15457 MIR3936-201ENST00000584304 110 ntBASIC5□□□□□ -1.61
MSH4O15457 AC010201.1-201ENST00000605051 540 ntBASIC5□□□□□ -1.61
MSH4O15457 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5□□□□□ -1.61
MSH4O15457 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5□□□□□ -1.61
MSH4O15457 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5□□□□□ -1.61
MSH4O15457 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5□□□□□ -1.61
MSH4O15457 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
MSH4O15457 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5□□□□□ -1.61
MSH4O15457 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5□□□□□ -1.61
MSH4O15457 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5□□□□□ -1.61
MSH4O15457 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
MSH4O15457 CASC19-204ENST00000641001 2055 ntBASIC5□□□□□ -1.61
MSH4O15457 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.99□□□□□ -1.61
MSH4O15457 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
MSH4O15457 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
MSH4O15457 CCT8P1-201ENST00000413611 1657 ntBASIC4.99□□□□□ -1.61
MSH4O15457 AC090017.1-201ENST00000548612 1779 ntBASIC4.99□□□□□ -1.61
MSH4O15457 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.99□□□□□ -1.61
MSH4O15457 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MSH4O15457 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.99□□□□□ -1.61
MSH4O15457 RNU6-1331P-201ENST00000363658 106 ntBASIC4.99□□□□□ -1.61
MSH4O15457 RNA5SP509-201ENST00000364577 119 ntBASIC4.99□□□□□ -1.61
MSH4O15457 RNU4-25P-201ENST00000410569 230 ntBASIC4.99□□□□□ -1.61
MSH4O15457 RN7SKP167-201ENST00000411047 285 ntBASIC4.99□□□□□ -1.61
MSH4O15457 AC098592.2-201ENST00000413158 265 ntBASIC4.99□□□□□ -1.61
MSH4O15457 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.99□□□□□ -1.61
MSH4O15457 AC004690.1-201ENST00000418216 328 ntBASIC4.99□□□□□ -1.61
MSH4O15457 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.99□□□□□ -1.61
MSH4O15457 AC062016.2-201ENST00000420950 676 ntBASIC4.99□□□□□ -1.61
MSH4O15457 CHIAP3-201ENST00000423668 1133 ntBASIC4.99□□□□□ -1.61
MSH4O15457 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.99□□□□□ -1.61
MSH4O15457 RPS29P17-201ENST00000430795 166 ntBASIC4.99□□□□□ -1.61
MSH4O15457 CBX1P1-201ENST00000440184 427 ntBASIC4.99□□□□□ -1.61
MSH4O15457 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms