Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 DNAJC19P1-201ENST00000455312 319 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 RN7SL145P-201ENST00000469955 296 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 RN7SL647P-201ENST00000485429 300 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 RPL31P61-201ENST00000496160 376 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC004069.2-201ENST00000505438 1114 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 RN7SKP64-201ENST00000517206 328 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 IGKV2-38-201ENST00000517443 247 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 IGKV1-32-201ENST00000519290 311 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 IGKV3D-25-201ENST00000519599 235 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 OR8X1P-201ENST00000534542 869 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC078878.1-201ENST00000539832 958 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 TRAV37-201ENST00000553906 342 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 CYP2C60P-201ENST00000566088 139 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AP000919.1-201ENST00000582850 985 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 Z98200.1-201ENST00000607298 470 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 AL353746.1-201ENST00000566293 6881 ntBASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LINC01558Q9Y6Z2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC090181.3-201ENST00000624777 1514 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 MFSD8-236ENST00000641509 4050 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AL031229.1-201ENST00000404273 224 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AL133388.1-201ENST00000404509 287 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 NUDT19P3-201ENST00000404698 555 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 OR4K12P-201ENST00000406538 961 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 MIR1182-201ENST00000408363 97 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AF186996.5-201ENST00000418098 904 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AL138799.3-201ENST00000438968 350 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 RPL23AP52-201ENST00000439311 478 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AL450996.1-201ENST00000445574 1202 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 RPL6P9-201ENST00000466502 859 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 CYCSP20-201ENST00000473154 315 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC012170.1-201ENST00000495139 359 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 NENFP3-201ENST00000503735 313 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC108145.1-201ENST00000503770 153 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 SNX5P1-201ENST00000505757 1041 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 IGHV3-76-201ENST00000522465 295 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 TRAV33-201ENST00000557514 338 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC037479.1-201ENST00000558361 625 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC027176.2-201ENST00000559166 746 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC068714.1-201ENST00000559623 800 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 AC007346.1-201ENST00000569208 867 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 TVP23CP2-201ENST00000571473 623 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 MIR4701-201ENST00000583094 63 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 MIR4512-201ENST00000583257 77 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 SCML2P1-201ENST00000584511 1100 ntBASIC2.24□□□□□ -2.05
LINC01558Q9Y6Z2 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms