Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 BMS1P10-201ENST00000443754 1120 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 RPL30P9-201ENST00000465586 330 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 OR4G11P-201ENST00000492842 939 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC026412.2-201ENST00000512270 1075 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 MTND5P4-201ENST00000514978 288 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 SOD1P3-201ENST00000518682 454 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AL139174.1-201ENST00000531489 886 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AP001858.2-201ENST00000536213 601 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 CYCSP2-201ENST00000558168 301 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC136619.2-201ENST00000563361 631 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC012417.1-201ENST00000582307 1039 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 KPNA2P3-201ENST00000584190 848 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC008687.2-201ENST00000597865 520 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC107214.2-201ENST00000608204 634 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC243773.3-201ENST00000613270 256 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 MIR6886-201ENST00000619864 61 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC127024.6-201ENST00000621598 424 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 CASC19-264ENST00000641912 1184 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 MFSD8-217ENST00000641178 4374 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AL118496.1-201ENST00000440201 1812 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.77□□□□□ -1.32
NPAS4Q8IUM7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
NPAS4Q8IUM7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
NPAS4Q8IUM7 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AC068733.2-201ENST00000605434 1418 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AL590763.1-201ENST00000398297 1545 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 RNU1-49P-201ENST00000363468 159 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 MIR92A2-201ENST00000385299 75 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 HMGB1P11-201ENST00000413899 637 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 PRELID3BP11-201ENST00000414230 479 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 NPM1P24-201ENST00000428039 894 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AC092013.1-201ENST00000438795 332 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AC243772.1-201ENST00000451620 410 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AL645937.3-201ENST00000453647 936 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AC010301.1-201ENST00000473936 355 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 RN7SL214P-201ENST00000487317 265 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 Y_RNA.667-201ENST00000516212 107 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AP002453.2-201ENST00000533503 320 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 GTF2IP22-201ENST00000554443 182 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AC136618.2-201ENST00000575091 400 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 MIR5186-201ENST00000577504 120 ntBASIC6.77□□□□□ -1.33
NPAS4Q8IUM7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms