Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC241377.1-201ENST00000619797 406 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC006504.8-201ENST00000621046 635 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC090017.1-201ENST00000548612 1779 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 FRG1BP-201ENST00000278882 761 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 FRG1CP-201ENST00000358464 769 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 RNA5SP512-201ENST00000364550 120 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 Y_RNA.481-201ENST00000384373 102 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 RNU6-907P-201ENST00000390924 102 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AL359715.1-201ENST00000404330 555 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 RPS6P23-201ENST00000413224 722 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 LYPLA1P1-201ENST00000434514 622 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 CXCR2P1-202ENST00000443392 1074 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC096576.1-201ENST00000489014 359 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC104109.1-201ENST00000498563 436 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 OR52H2P-201ENST00000514607 902 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 RNA5SP318-201ENST00000516352 92 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AP000790.1-201ENST00000528891 737 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 HIF1AP1-201ENST00000553642 175 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 HMGN1P30-201ENST00000589286 268 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AP001429.1-201ENST00000602568 530 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AL355333.1-201ENST00000605632 279 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC011373.1-201ENST00000607270 237 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC090948.2-201ENST00000607363 564 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AP001521.1-201ENST00000609150 300 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AL080312.2-201ENST00000613001 630 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC040896.1-201ENST00000613819 479 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AC009268.2-201ENST00000621925 457 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 TSHZ2-205ENST00000626626 670 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 MIR4302-201ENST00000638058 60 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 DDX18P4-201ENST00000511690 1966 ntBASIC7.25□□□□□ -1.25
RNF135Q8IUD6 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RNF135Q8IUD6 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 AC132219.2-201ENST00000624416 2327 ntBASIC7.24□□□□□ -1.25
RNF135Q8IUD6 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 LINC01613-201ENST00000561476 2780 ntBASIC7.24□□□□□ -1.25
RNF135Q8IUD6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF135Q8IUD6 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms