Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC111193.1-201ENST00000504097 155 ntBASIC8.53□□□□□ -1.04
ATN1P54259 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC8.53□□□□□ -1.04
ATN1P54259 RPL7L1P7-201ENST00000509986 724 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AC021146.3-201ENST00000511911 260 ntBASIC8.53□□□□□ -1.04
ATN1P54259 RNU6-1004P-201ENST00000516584 111 ntBASIC8.53□□□□□ -1.04
ATN1P54259 RNU6-919P-201ENST00000516731 104 ntBASIC8.53□□□□□ -1.04
ATN1P54259 SNORA31.18-201ENST00000517043 134 ntBASIC8.53□□□□□ -1.04
ATN1P54259 IGKV3-34-201ENST00000521692 293 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC8.53□□□□□ -1.04
ATN1P54259 AC131935.1-201ENST00000524621 333 ntBASIC8.53□□□□□ -1.04
ATN1P54259 OR7E96P-201ENST00000530816 976 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC8.53□□□□□ -1.04
ATN1P54259 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC8.53□□□□□ -1.04
ATN1P54259 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC8.53□□□□□ -1.04
ATN1P54259 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC8.53□□□□□ -1.04
ATN1P54259 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8.53□□□□□ -1.04
ATN1P54259 AC073488.7-201ENST00000633785 778 ntBASIC8.53□□□□□ -1.04
ATN1P54259 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 PARP1P1-201ENST00000413631 3026 ntBASIC8.53□□□□□ -1.04
ATN1P54259 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.53□□□□□ -1.04
ATN1P54259 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC8.53□□□□□ -1.04
ATN1P54259 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC8.53□□□□□ -1.04
ATN1P54259 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
ATN1P54259 GTF2IP1-202ENST00000614592 2047 ntBASIC8.53□□□□□ -1.04
ATN1P54259 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
ATN1P54259 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
ATN1P54259 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
ATN1P54259 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC8.52□□□□□ -1.05
ATN1P54259 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.52□□□□□ -1.05
ATN1P54259 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATN1P54259 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.52□□□□□ -1.05
ATN1P54259 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ATN1P54259 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC8.52□□□□□ -1.05
ATN1P54259 AL442639.1-201ENST00000625030 1899 ntBASIC8.52□□□□□ -1.05
ATN1P54259 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATN1P54259 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.52□□□□□ -1.05
ATN1P54259 SNORA62.1-201ENST00000364287 154 ntBASIC8.52□□□□□ -1.05
ATN1P54259 RN7SKP171-201ENST00000364417 303 ntBASIC8.52□□□□□ -1.05
ATN1P54259 RNU6-1317P-201ENST00000364582 104 ntBASIC8.52□□□□□ -1.05
ATN1P54259 Y_RNA.418-201ENST00000384029 102 ntBASIC8.52□□□□□ -1.05
ATN1P54259 SNORA10B-201ENST00000384458 133 ntBASIC8.52□□□□□ -1.05
ATN1P54259 PRELID3BP11-201ENST00000414230 479 ntBASIC8.52□□□□□ -1.05
ATN1P54259 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.52□□□□□ -1.05
ATN1P54259 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.52□□□□□ -1.05
ATN1P54259 LINC00328-2P-201ENST00000436585 219 ntBASIC8.52□□□□□ -1.05
ATN1P54259 RPSAP40-201ENST00000442343 891 ntBASIC8.52□□□□□ -1.05
ATN1P54259 AL161454.1-201ENST00000446226 569 ntBASIC8.52□□□□□ -1.05
ATN1P54259 RN7SL791P-201ENST00000467868 295 ntBASIC8.52□□□□□ -1.05
ATN1P54259 AC068134.3-201ENST00000513620 788 ntBASIC8.52□□□□□ -1.05
ATN1P54259 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC8.52□□□□□ -1.05
ATN1P54259 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC8.52□□□□□ -1.05
ATN1P54259 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC8.52□□□□□ -1.05
ATN1P54259 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC8.52□□□□□ -1.05
ATN1P54259 MIR4703-201ENST00000577728 79 ntBASIC8.52□□□□□ -1.05
ATN1P54259 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC8.52□□□□□ -1.05
ATN1P54259 AL121992.2-201ENST00000606262 256 ntBASIC8.52□□□□□ -1.05
ATN1P54259 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
ATN1P54259 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATN1P54259 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
ATN1P54259 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ATN1P54259 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATN1P54259 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.52□□□□□ -1.05
ATN1P54259 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATN1P54259 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
ATN1P54259 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
ATN1P54259 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
ATN1P54259 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
ATN1P54259 AL136140.2-201ENST00000624717 1705 ntBASIC8.51□□□□□ -1.05
ATN1P54259 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ATN1P54259 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.51□□□□□ -1.05
ATN1P54259 AL391684.1-202ENST00000641293 1636 ntBASIC8.51□□□□□ -1.05
ATN1P54259 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ATN1P54259 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ATN1P54259 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
ATN1P54259 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
ATN1P54259 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC8.51□□□□□ -1.05
ATN1P54259 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.51□□□□□ -1.05
ATN1P54259 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
ATN1P54259 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
ATN1P54259 AL353763.2-201ENST00000623489 1903 ntBASIC8.51□□□□□ -1.05
ATN1P54259 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC8.51□□□□□ -1.05
ATN1P54259 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.51□□□□□ -1.05
ATN1P54259 Y_RNA.2-201ENST00000362330 96 ntBASIC8.51□□□□□ -1.05
ATN1P54259 Y_RNA.237-201ENST00000364439 102 ntBASIC8.51□□□□□ -1.05
ATN1P54259 RNU6-1029P-201ENST00000384109 107 ntBASIC8.51□□□□□ -1.05
ATN1P54259 RNU1-149P-201ENST00000390870 161 ntBASIC8.51□□□□□ -1.05
ATN1P54259 MIR450B-201ENST00000401182 78 ntBASIC8.51□□□□□ -1.05
ATN1P54259 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.51□□□□□ -1.05
ATN1P54259 RN7SKP86-201ENST00000410454 332 ntBASIC8.51□□□□□ -1.05
ATN1P54259 BX284632.2-201ENST00000421091 399 ntBASIC8.51□□□□□ -1.05
ATN1P54259 AL136454.1-201ENST00000443181 466 ntBASIC8.51□□□□□ -1.05
ATN1P54259 LAMTOR5P1-201ENST00000444290 270 ntBASIC8.51□□□□□ -1.05
ATN1P54259 AL359955.2-201ENST00000445380 353 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms