Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.79□□□□□ -1.48
MBD4O95243 RNU7-27P-201ENST00000459281 62 ntBASIC5.79□□□□□ -1.48
MBD4O95243 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.79□□□□□ -1.48
MBD4O95243 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.79□□□□□ -1.48
MBD4O95243 RN7SL558P-201ENST00000497468 299 ntBASIC5.79□□□□□ -1.48
MBD4O95243 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.79□□□□□ -1.48
MBD4O95243 AC025459.1-201ENST00000504072 156 ntBASIC5.79□□□□□ -1.48
MBD4O95243 AC010468.3-201ENST00000508225 458 ntBASIC5.79□□□□□ -1.48
MBD4O95243 AC008628.1-201ENST00000508663 265 ntBASIC5.79□□□□□ -1.48
MBD4O95243 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.79□□□□□ -1.48
MBD4O95243 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MBD4O95243 RN7SKP276-201ENST00000516242 268 ntBASIC5.79□□□□□ -1.48
MBD4O95243 SNORA76.2-201ENST00000517095 137 ntBASIC5.79□□□□□ -1.48
MBD4O95243 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.79□□□□□ -1.48
MBD4O95243 RPL23AP53-201ENST00000521854 457 ntBASIC5.79□□□□□ -1.48
MBD4O95243 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.79□□□□□ -1.48
MBD4O95243 AC133555.2-201ENST00000550213 292 ntBASIC5.79□□□□□ -1.48
MBD4O95243 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.79□□□□□ -1.48
MBD4O95243 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.79□□□□□ -1.48
MBD4O95243 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.79□□□□□ -1.48
MBD4O95243 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.79□□□□□ -1.48
MBD4O95243 SNORA74C-1-201ENST00000580726 201 ntBASIC5.79□□□□□ -1.48
MBD4O95243 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.79□□□□□ -1.48
MBD4O95243 AC092474.3-201ENST00000603022 568 ntBASIC5.79□□□□□ -1.48
MBD4O95243 AL121932.1-201ENST00000605542 214 ntBASIC5.79□□□□□ -1.48
MBD4O95243 STX3-208ENST00000641815 3236 ntBASIC5.79□□□□□ -1.48
MBD4O95243 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MBD4O95243 AC073136.1-201ENST00000449426 2884 ntBASIC5.79□□□□□ -1.48
MBD4O95243 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
MBD4O95243 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MBD4O95243 AC092079.1-201ENST00000558620 1985 ntBASIC5.78□□□□□ -1.48
MBD4O95243 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MBD4O95243 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
MBD4O95243 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MBD4O95243 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.78□□□□□ -1.48
MBD4O95243 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MBD4O95243 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MBD4O95243 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MBD4O95243 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MBD4O95243 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MBD4O95243 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MBD4O95243 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 MTND2P11-201ENST00000423638 648 ntBASIC5.78□□□□□ -1.48
MBD4O95243 NRBF2P3-201ENST00000432731 865 ntBASIC5.78□□□□□ -1.48
MBD4O95243 AC092162.1-201ENST00000432828 434 ntBASIC5.78□□□□□ -1.48
MBD4O95243 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.78□□□□□ -1.48
MBD4O95243 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.78□□□□□ -1.48
MBD4O95243 NPM1P17-201ENST00000479221 602 ntBASIC5.78□□□□□ -1.48
MBD4O95243 RPL23AP73-201ENST00000492507 471 ntBASIC5.78□□□□□ -1.48
MBD4O95243 SCARNA22-201ENST00000503991 125 ntBASIC5.78□□□□□ -1.48
MBD4O95243 AC108471.1-201ENST00000513977 287 ntBASIC5.78□□□□□ -1.48
MBD4O95243 BUD31P1-201ENST00000521828 359 ntBASIC5.78□□□□□ -1.48
MBD4O95243 HAUS1P3-201ENST00000523909 662 ntBASIC5.78□□□□□ -1.48
MBD4O95243 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.78□□□□□ -1.48
MBD4O95243 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
MBD4O95243 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.78□□□□□ -1.48
MBD4O95243 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.78□□□□□ -1.48
MBD4O95243 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.78□□□□□ -1.48
MBD4O95243 AC093249.4-201ENST00000564755 259 ntBASIC5.78□□□□□ -1.48
MBD4O95243 RN7SL802P-201ENST00000577858 299 ntBASIC5.78□□□□□ -1.48
MBD4O95243 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.78□□□□□ -1.48
MBD4O95243 MIR4270-201ENST00000581799 70 ntBASIC5.78□□□□□ -1.48
MBD4O95243 AC010928.1-201ENST00000592477 1447 ntBASIC5.78□□□□□ -1.48
MBD4O95243 AC087283.1-201ENST00000604029 1074 ntBASIC5.78□□□□□ -1.48
MBD4O95243 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 AC006213.5-201ENST00000619673 288 ntBASIC5.78□□□□□ -1.48
MBD4O95243 AP003497.2-201ENST00000624220 967 ntBASIC5.78□□□□□ -1.48
MBD4O95243 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MBD4O95243 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 AC073869.10-201ENST00000642016 354 ntBASIC5.78□□□□□ -1.48
MBD4O95243 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MBD4O95243 AP001002.1-201ENST00000625148 1513 ntBASIC5.78□□□□□ -1.48
MBD4O95243 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
MBD4O95243 AC104260.2-201ENST00000623551 3497 ntBASIC5.78□□□□□ -1.48
MBD4O95243 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MBD4O95243 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MBD4O95243 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.77□□□□□ -1.49
MBD4O95243 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MBD4O95243 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MBD4O95243 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MBD4O95243 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MBD4O95243 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MBD4O95243 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MBD4O95243 HMGB1P10-201ENST00000395823 563 ntBASIC5.77□□□□□ -1.49
MBD4O95243 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MBD4O95243 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.77□□□□□ -1.49
MBD4O95243 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.77□□□□□ -1.49
MBD4O95243 RPL37P18-201ENST00000411602 243 ntBASIC5.77□□□□□ -1.49
MBD4O95243 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.77□□□□□ -1.49
MBD4O95243 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.77□□□□□ -1.49
MBD4O95243 PTP4A1P3-201ENST00000433661 420 ntBASIC5.77□□□□□ -1.49
MBD4O95243 RPS17P8-201ENST00000434525 335 ntBASIC5.77□□□□□ -1.49
MBD4O95243 AL590762.3-201ENST00000436372 640 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms