Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX11Q9Y5W9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX11Q9Y5W9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX11Q9Y5W9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 RCC2P6-201ENST00000526625 1557 ntBASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 AP000692.2-201ENST00000608391 879 ntBASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 AC011298.2-201ENST00000617989 482 ntBASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 PHGDH-210ENST00000641115 1638 ntBASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX11Q9Y5W9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 AC092720.2-201ENST00000602388 1665 ntBASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 AK4P3-201ENST00000418260 669 ntBASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 AC008040.2-201ENST00000461049 708 ntBASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.27■□□□□ 0.68
SNX11Q9Y5W9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX11Q9Y5W9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
SNX11Q9Y5W9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.27■□□□□ 0.67
SNX11Q9Y5W9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SNX11Q9Y5W9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 BX664615.1-201ENST00000443558 458 ntBASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 HLA-A-209ENST00000638375 975 ntBASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX11Q9Y5W9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 AC004951.3-201ENST00000418645 1148 ntBASIC19.25■□□□□ 0.67
SNX11Q9Y5W9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms