Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.2■■□□□ 1.3
PCDHAC2Q9Y5I4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHAC2Q9Y5I4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 AP001271.2-201ENST00000624018 1556 ntBASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 PCED1CP-201ENST00000419887 785 ntBASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 CKBP1-201ENST00000565489 1086 ntBASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHAC2Q9Y5I4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 KRT18P56-201ENST00000507275 550 ntBASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 AP000550.4-202ENST00000639755 178 ntBASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHAC2Q9Y5I4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 AC009947.2-201ENST00000444014 672 ntBASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHAC2Q9Y5I4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHAC2Q9Y5I4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHAC2Q9Y5I4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHAC2Q9Y5I4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHAC2Q9Y5I4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms