Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PCDHGC4Q9Y5F7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGC4Q9Y5F7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC4Q9Y5F7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC4Q9Y5F7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
PCDHGC4Q9Y5F7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGC4Q9Y5F7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC4Q9Y5F7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC4Q9Y5F7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGC4Q9Y5F7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 AF186192.3-201ENST00000583427 947 ntBASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGC4Q9Y5F7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 AP002982.1-201ENST00000492365 877 ntBASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC4Q9Y5F7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
PCDHGC4Q9Y5F7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGC4Q9Y5F7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
PCDHGC4Q9Y5F7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 RPS2P4-201ENST00000476944 856 ntBASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 AC093827.2-201ENST00000512654 315 ntBASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 AL135905.2-201ENST00000584934 1404 ntBASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC4Q9Y5F7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 AL353807.1-201ENST00000427475 662 ntBASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 AC233702.5-201ENST00000584107 538 ntBASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms