Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCDHB1Q9Y5F3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB1Q9Y5F3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 AL158211.5-201ENST00000623583 2518 ntBASIC19.47■□□□□ 0.71
PCDHB1Q9Y5F3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 AC124283.5-201ENST00000624661 1809 ntBASIC19.46■□□□□ 0.71
PCDHB1Q9Y5F3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHB1Q9Y5F3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB1Q9Y5F3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms