Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 AC133552.2-202ENST00000575694 574 ntBASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF6Q9Y4K3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 AC141586.3-201ENST00000562166 1838 ntBASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 AC004911.1-201ENST00000416316 871 ntBASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 CROCCP3-202ENST00000420820 1947 ntBASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF6Q9Y4K3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 TEX21P-204ENST00000641479 1693 ntBASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 AL162430.1-201ENST00000480705 870 ntBASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF6Q9Y4K3 AL049812.1-201ENST00000432563 2267 ntBASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.91■□□□□ 0.62
TRAF6Q9Y4K3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF6Q9Y4K3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAF6Q9Y4K3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAF6Q9Y4K3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAF6Q9Y4K3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAF6Q9Y4K3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAF6Q9Y4K3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAF6Q9Y4K3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAF6Q9Y4K3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms