Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 SLC25A24-204ENST00000569674 2357 ntBASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
FNDC3AQ9Y2H6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FNDC3AQ9Y2H6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 AL353708.3-201ENST00000610272 989 ntBASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 AC026471.5-201ENST00000615068 467 ntBASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
FNDC3AQ9Y2H6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 AP003071.4-201ENST00000562276 1284 ntBASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.86■□□□□ 0.77
FNDC3AQ9Y2H6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.85■□□□□ 0.77
FNDC3AQ9Y2H6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms