Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.97■□□□□ 0.47
NPIPA1Q9UND3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.96■□□□□ 0.47
NPIPA1Q9UND3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NPIPA1Q9UND3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 MMP23A-201ENST00000234610 1017 ntBASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 AL353708.3-201ENST00000610272 989 ntBASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 TCF3P1-201ENST00000423021 1937 ntBASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA1Q9UND3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA1Q9UND3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 BX119927.1-201ENST00000636596 1552 ntBASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA1Q9UND3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms