Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.65■□□□□ 0.74
MBD1Q9UIS9 FAM87A-204ENST00000613235 858 ntBASIC19.65■□□□□ 0.74
MBD1Q9UIS9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD1Q9UIS9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD1Q9UIS9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD1Q9UIS9 AC018553.1-201ENST00000616682 1458 ntBASIC19.65■□□□□ 0.74
MBD1Q9UIS9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.65■□□□□ 0.74
MBD1Q9UIS9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD1Q9UIS9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
MBD1Q9UIS9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
MBD1Q9UIS9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
MBD1Q9UIS9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
MBD1Q9UIS9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 AC131212.4-201ENST00000623606 975 ntBASIC19.64■□□□□ 0.73
MBD1Q9UIS9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD1Q9UIS9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 TUBB8P6-201ENST00000436895 1288 ntBASIC19.63■□□□□ 0.73
MBD1Q9UIS9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 AC130371.2-201ENST00000619443 611 ntBASIC19.63■□□□□ 0.73
MBD1Q9UIS9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD1Q9UIS9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD1Q9UIS9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MBD1Q9UIS9 AC008040.2-201ENST00000461049 708 ntBASIC19.61■□□□□ 0.73
MBD1Q9UIS9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms