Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 GPX1P1-201ENST00000388829 606 ntBASIC17.07■□□□□ 0.32
DUX4Q9UBX2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 AC104771.1-201ENST00000603335 964 ntBASIC17.07■□□□□ 0.32
DUX4Q9UBX2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DUX4Q9UBX2 MKRN4P-201ENST00000444706 1521 ntBASIC17.06■□□□□ 0.32
DUX4Q9UBX2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 AL109923.1-201ENST00000618799 583 ntBASIC17.06■□□□□ 0.32
DUX4Q9UBX2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
DUX4Q9UBX2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 TSPY6P-201ENST00000448518 926 ntBASIC17.05■□□□□ 0.32
DUX4Q9UBX2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 AC098934.4-201ENST00000564127 592 ntBASIC17.05■□□□□ 0.32
DUX4Q9UBX2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 KRT17P1-201ENST00000399211 1546 ntBASIC17.05■□□□□ 0.32
DUX4Q9UBX2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
DUX4Q9UBX2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 AC020907.5-201ENST00000624372 1936 ntBASIC17.04■□□□□ 0.32
DUX4Q9UBX2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 AL138781.1-201ENST00000566567 1274 ntBASIC17.04■□□□□ 0.32
DUX4Q9UBX2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 AC007225.1-201ENST00000566331 1836 ntBASIC17.04■□□□□ 0.32
DUX4Q9UBX2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.04■□□□□ 0.32
DUX4Q9UBX2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms