Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRIT1Q9P2V4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRIT1Q9P2V4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRIT1Q9P2V4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
LRIT1Q9P2V4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.83■□□□□ 0.61
LRIT1Q9P2V4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
LRIT1Q9P2V4 AP005212.1-201ENST00000581547 1997 ntBASIC18.83■□□□□ 0.61
LRIT1Q9P2V4 LINC01006-201ENST00000333319 2292 ntBASIC18.83■□□□□ 0.61
LRIT1Q9P2V4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.83■□□□□ 0.61
LRIT1Q9P2V4 ARMC10P1-201ENST00000313754 855 ntBASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 KRT18P35-201ENST00000510488 1269 ntBASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.83■□□□□ 0.6
LRIT1Q9P2V4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 MFAP1P1-201ENST00000442257 1255 ntBASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 ATP5G1P1-201ENST00000448724 379 ntBASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 AC091390.4-202ENST00000476426 537 ntBASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 AC010203.1-204ENST00000548782 407 ntBASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 AL691432.2-201ENST00000607222 2038 ntBASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.82■□□□□ 0.6
LRIT1Q9P2V4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 Z85996.1-201ENST00000494644 937 ntBASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 AL160286.2-201ENST00000567150 934 ntBASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIT1Q9P2V4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 AL391422.3-201ENST00000603791 2761 ntBASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 AC096733.2-201ENST00000609937 1394 ntBASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIT1Q9P2V4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIT1Q9P2V4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIT1Q9P2V4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRIT1Q9P2V4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRIT1Q9P2V4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIT1Q9P2V4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRIT1Q9P2V4 INGX-201ENST00000359239 846 ntBASIC18.79■□□□□ 0.6
LRIT1Q9P2V4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.79■□□□□ 0.6
LRIT1Q9P2V4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms