Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL20A1Q9P218 AC073508.3-201ENST00000619697 1419 ntBASIC22.07■■□□□ 1.12
COL20A1Q9P218 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL20A1Q9P218 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL20A1Q9P218 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 TSPY14P-201ENST00000303979 915 ntBASIC22.07■■□□□ 1.12
COL20A1Q9P218 TERF1P1-201ENST00000311003 1181 ntBASIC22.07■■□□□ 1.12
COL20A1Q9P218 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL20A1Q9P218 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 MFAP1P1-201ENST00000442257 1255 ntBASIC22.07■■□□□ 1.12
COL20A1Q9P218 KRT18P57-201ENST00000443599 1254 ntBASIC22.07■■□□□ 1.12
COL20A1Q9P218 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL20A1Q9P218 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
COL20A1Q9P218 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL20A1Q9P218 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL20A1Q9P218 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 SLC25A3P1-201ENST00000443844 931 ntBASIC22.06■■□□□ 1.12
COL20A1Q9P218 ECEL1P2-202ENST00000465689 757 ntBASIC22.06■■□□□ 1.12
COL20A1Q9P218 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL20A1Q9P218 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL20A1Q9P218 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL20A1Q9P218 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.06■■□□□ 1.12
COL20A1Q9P218 LINC01521-201ENST00000504184 1943 ntBASIC22.06■■□□□ 1.12
COL20A1Q9P218 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL20A1Q9P218 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL20A1Q9P218 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
COL20A1Q9P218 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL20A1Q9P218 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL20A1Q9P218 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL20A1Q9P218 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL20A1Q9P218 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.05■■□□□ 1.12
COL20A1Q9P218 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL20A1Q9P218 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.05■■□□□ 1.12
COL20A1Q9P218 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.05■■□□□ 1.12
COL20A1Q9P218 EGLN1P1-201ENST00000531623 762 ntBASIC22.05■■□□□ 1.12
COL20A1Q9P218 AC010203.1-204ENST00000548782 407 ntBASIC22.05■■□□□ 1.12
COL20A1Q9P218 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.05■■□□□ 1.12
COL20A1Q9P218 AC092865.7-201ENST00000641832 219 ntBASIC22.05■■□□□ 1.12
COL20A1Q9P218 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL20A1Q9P218 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
COL20A1Q9P218 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.05■■□□□ 1.12
COL20A1Q9P218 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL20A1Q9P218 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL20A1Q9P218 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
COL20A1Q9P218 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL20A1Q9P218 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL20A1Q9P218 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL20A1Q9P218 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.04■■□□□ 1.12
COL20A1Q9P218 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.04■■□□□ 1.12
COL20A1Q9P218 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
COL20A1Q9P218 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL20A1Q9P218 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.04■■□□□ 1.12
COL20A1Q9P218 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.04■■□□□ 1.12
COL20A1Q9P218 C2orf69P3-201ENST00000565542 1120 ntBASIC22.04■■□□□ 1.12
COL20A1Q9P218 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.04■■□□□ 1.12
COL20A1Q9P218 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL20A1Q9P218 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL20A1Q9P218 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
COL20A1Q9P218 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL20A1Q9P218 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.04■■□□□ 1.12
COL20A1Q9P218 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL20A1Q9P218 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL20A1Q9P218 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL20A1Q9P218 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 FAM87A-204ENST00000613235 858 ntBASIC22.03■■□□□ 1.12
COL20A1Q9P218 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL20A1Q9P218 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL20A1Q9P218 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL20A1Q9P218 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL20A1Q9P218 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL20A1Q9P218 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL20A1Q9P218 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL20A1Q9P218 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.03■■□□□ 1.12
COL20A1Q9P218 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms