Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.2■□□□□ 0.5
CNIH4Q9P003 TREX1-205ENST00000625293 1783 ntBASIC18.19■□□□□ 0.5
CNIH4Q9P003 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 AC124283.5-201ENST00000624661 1809 ntBASIC18.19■□□□□ 0.5
CNIH4Q9P003 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 AC110285.5-201ENST00000611501 352 ntBASIC18.19■□□□□ 0.5
CNIH4Q9P003 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH4Q9P003 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
CNIH4Q9P003 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH4Q9P003 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH4Q9P003 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH4Q9P003 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH4Q9P003 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH4Q9P003 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH4Q9P003 KRASP1-201ENST00000407852 552 ntBASIC18.18■□□□□ 0.5
CNIH4Q9P003 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH4Q9P003 AC018445.3-201ENST00000624177 1945 ntBASIC18.17■□□□□ 0.5
CNIH4Q9P003 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 AC098818.2-201ENST00000564925 2320 ntBASIC18.17■□□□□ 0.5
CNIH4Q9P003 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 AC093484.2-201ENST00000580996 2166 ntBASIC18.17■□□□□ 0.5
CNIH4Q9P003 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.17■□□□□ 0.5
CNIH4Q9P003 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH4Q9P003 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH4Q9P003 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.16■□□□□ 0.5
CNIH4Q9P003 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH4Q9P003 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH4Q9P003 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH4Q9P003 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CNIH4Q9P003 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH4Q9P003 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.16■□□□□ 0.5
CNIH4Q9P003 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CNIH4Q9P003 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.16■□□□□ 0.5
CNIH4Q9P003 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH4Q9P003 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CNIH4Q9P003 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.16■□□□□ 0.5
CNIH4Q9P003 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH4Q9P003 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH4Q9P003 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.16■□□□□ 0.5
CNIH4Q9P003 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.16■□□□□ 0.5
CNIH4Q9P003 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.16■□□□□ 0.5
CNIH4Q9P003 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms