Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 KRT18P16-201ENST00000510337 1294 ntBASIC18.04■□□□□ 0.48
HPF1Q9NWY4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 AL353708.3-201ENST00000610272 989 ntBASIC18.04■□□□□ 0.48
HPF1Q9NWY4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
HPF1Q9NWY4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.03■□□□□ 0.48
HPF1Q9NWY4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 FAM197Y1-201ENST00000421178 764 ntBASIC18.03■□□□□ 0.48
HPF1Q9NWY4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 AL355355.2-201ENST00000442321 338 ntBASIC18.03■□□□□ 0.48
HPF1Q9NWY4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 C1QL1P1-201ENST00000568105 661 ntBASIC18.03■□□□□ 0.48
HPF1Q9NWY4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HPF1Q9NWY4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 LINC01006-201ENST00000333319 2292 ntBASIC18.02■□□□□ 0.48
HPF1Q9NWY4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 NIFKP9-201ENST00000419265 221 ntBASIC18.02■□□□□ 0.48
HPF1Q9NWY4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 AC026471.5-201ENST00000615068 467 ntBASIC18.02■□□□□ 0.48
HPF1Q9NWY4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HPF1Q9NWY4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.02■□□□□ 0.47
HPF1Q9NWY4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
HPF1Q9NWY4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
HPF1Q9NWY4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.02■□□□□ 0.47
HPF1Q9NWY4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HPF1Q9NWY4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HPF1Q9NWY4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HPF1Q9NWY4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 KSR1P1-201ENST00000446298 240 ntBASIC18.01■□□□□ 0.47
HPF1Q9NWY4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 CR392000.1-201ENST00000624770 1228 ntBASIC18.01■□□□□ 0.47
HPF1Q9NWY4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HPF1Q9NWY4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms