Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 AC098590.1-201ENST00000468126 897 ntBASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 AL135905.2-201ENST00000584934 1404 ntBASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SDHAF3Q9NRP4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 AL353807.1-201ENST00000427475 662 ntBASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SDHAF3Q9NRP4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SDHAF3Q9NRP4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 RARRES2P10-201ENST00000564312 460 ntBASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SDHAF3Q9NRP4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.83■□□□□ 0.45
SDHAF3Q9NRP4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
SDHAF3Q9NRP4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SDHAF3Q9NRP4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SDHAF3Q9NRP4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.83■□□□□ 0.45
SDHAF3Q9NRP4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms