Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 DUSP5P1-201ENST00000441325 1139 ntBASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM7Q9NR12 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 YBX1P2-201ENST00000489612 999 ntBASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.84■■□□□ 1.09
PDLIM7Q9NR12 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 AP001271.2-201ENST00000624018 1556 ntBASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 TCF3P1-201ENST00000423021 1937 ntBASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 AP006587.1-201ENST00000534129 1502 ntBASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.83■■□□□ 1.09
PDLIM7Q9NR12 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDLIM7Q9NR12 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDLIM7Q9NR12 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
PDLIM7Q9NR12 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDLIM7Q9NR12 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 TSPY5P-201ENST00000426936 936 ntBASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 AC009237.14-201ENST00000609975 1594 ntBASIC21.82■■□□□ 1.08
PDLIM7Q9NR12 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 AC026396.1-201ENST00000419388 421 ntBASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 FAM207BP-201ENST00000447172 505 ntBASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 SLC25A1P4-201ENST00000567977 778 ntBASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM7Q9NR12 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 PCED1CP-201ENST00000419887 785 ntBASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 YBX1P10-201ENST00000444752 975 ntBASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 AC092647.4-201ENST00000457211 535 ntBASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.8■■□□□ 1.08
PDLIM7Q9NR12 KRT18P16-201ENST00000510337 1294 ntBASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms