Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 CCR12P-201ENST00000446203 998 ntBASIC23.01■■□□□ 1.27
DDX4Q9NQI0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
DDX4Q9NQI0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23■■□□□ 1.27
DDX4Q9NQI0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
DDX4Q9NQI0 AL157384.1-201ENST00000445995 2473 ntBASIC23■■□□□ 1.27
DDX4Q9NQI0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX4Q9NQI0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX4Q9NQI0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX4Q9NQI0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX4Q9NQI0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23■■□□□ 1.27
DDX4Q9NQI0 BX664615.1-201ENST00000443558 458 ntBASIC23■■□□□ 1.27
DDX4Q9NQI0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23■■□□□ 1.27
DDX4Q9NQI0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23■■□□□ 1.27
DDX4Q9NQI0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX4Q9NQI0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX4Q9NQI0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23■■□□□ 1.27
DDX4Q9NQI0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23■■□□□ 1.27
DDX4Q9NQI0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23■■□□□ 1.27
DDX4Q9NQI0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX4Q9NQI0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23■■□□□ 1.27
DDX4Q9NQI0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
DDX4Q9NQI0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX4Q9NQI0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 AK4P3-201ENST00000418260 669 ntBASIC22.99■■□□□ 1.27
DDX4Q9NQI0 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 AC010653.2-201ENST00000623505 997 ntBASIC22.99■■□□□ 1.27
DDX4Q9NQI0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX4Q9NQI0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 CKBP1-201ENST00000565489 1086 ntBASIC22.98■■□□□ 1.27
DDX4Q9NQI0 AL353719.1-201ENST00000566847 864 ntBASIC22.98■■□□□ 1.27
DDX4Q9NQI0 AC139887.4-201ENST00000607877 719 ntBASIC22.98■■□□□ 1.27
DDX4Q9NQI0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 LINC01006-201ENST00000333319 2292 ntBASIC22.98■■□□□ 1.27
DDX4Q9NQI0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX4Q9NQI0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX4Q9NQI0 AC063952.2-201ENST00000498792 1227 ntBASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms