Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.2■■□□□ 1.14
A1CFQ9NQ94 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
A1CFQ9NQ94 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
A1CFQ9NQ94 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
A1CFQ9NQ94 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
A1CFQ9NQ94 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.2■■□□□ 1.14
A1CFQ9NQ94 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
A1CFQ9NQ94 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 AC128688.1-201ENST00000487626 519 ntBASIC22.19■■□□□ 1.14
A1CFQ9NQ94 DUX4L26-201ENST00000489078 1255 ntBASIC22.19■■□□□ 1.14
A1CFQ9NQ94 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 AC006011.2-201ENST00000621313 1158 ntBASIC22.19■■□□□ 1.14
A1CFQ9NQ94 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.19■■□□□ 1.14
A1CFQ9NQ94 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
A1CFQ9NQ94 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.18■■□□□ 1.14
A1CFQ9NQ94 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.18■■□□□ 1.14
A1CFQ9NQ94 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 AL160286.2-201ENST00000567150 934 ntBASIC22.18■■□□□ 1.14
A1CFQ9NQ94 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
A1CFQ9NQ94 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 LIN28AP1-201ENST00000429574 405 ntBASIC22.17■■□□□ 1.14
A1CFQ9NQ94 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
A1CFQ9NQ94 AC009237.14-201ENST00000609975 1594 ntBASIC22.16■■□□□ 1.14
A1CFQ9NQ94 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 GABARAPL3-202ENST00000624044 1851 ntBASIC22.16■■□□□ 1.14
A1CFQ9NQ94 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
A1CFQ9NQ94 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.15■■□□□ 1.14
A1CFQ9NQ94 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
A1CFQ9NQ94 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
A1CFQ9NQ94 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
A1CFQ9NQ94 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.15■■□□□ 1.14
A1CFQ9NQ94 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
A1CFQ9NQ94 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
A1CFQ9NQ94 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
A1CFQ9NQ94 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.15■■□□□ 1.14
A1CFQ9NQ94 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
A1CFQ9NQ94 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms