Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZFYVE28Q9HCC9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 AC111152.3-201ENST00000569699 673 ntBASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 AC092329.2-201ENST00000598402 547 ntBASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZFYVE28Q9HCC9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 AC092720.2-201ENST00000602388 1665 ntBASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 AL845331.1-201ENST00000424978 1190 ntBASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 FBXW4P1-201ENST00000426721 2239 ntBASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZFYVE28Q9HCC9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 SPDYE15P-201ENST00000424157 909 ntBASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.27■■□□□ 1.16
ZFYVE28Q9HCC9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.15
ZFYVE28Q9HCC9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 KRT8P41-201ENST00000533985 1514 ntBASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
ZFYVE28Q9HCC9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 CR769767.2-201ENST00000622735 460 ntBASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.25■■□□□ 1.15
ZFYVE28Q9HCC9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms