Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PIF1Q9H611 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PIF1Q9H611 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.56■□□□□ 0.56
PIF1Q9H611 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.56■□□□□ 0.56
PIF1Q9H611 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
PIF1Q9H611 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.56■□□□□ 0.56
PIF1Q9H611 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PIF1Q9H611 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PIF1Q9H611 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.55■□□□□ 0.56
PIF1Q9H611 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PIF1Q9H611 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.55■□□□□ 0.56
PIF1Q9H611 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.55■□□□□ 0.56
PIF1Q9H611 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.55■□□□□ 0.56
PIF1Q9H611 AC013268.1-206ENST00000638368 961 ntBASIC18.55■□□□□ 0.56
PIF1Q9H611 AC112229.1-201ENST00000639295 961 ntBASIC18.55■□□□□ 0.56
PIF1Q9H611 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PIF1Q9H611 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
PIF1Q9H611 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 PHGDH-210ENST00000641115 1638 ntBASIC18.55■□□□□ 0.56
PIF1Q9H611 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PIF1Q9H611 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.55■□□□□ 0.56
PIF1Q9H611 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.54■□□□□ 0.56
PIF1Q9H611 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.54■□□□□ 0.56
PIF1Q9H611 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PIF1Q9H611 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.54■□□□□ 0.56
PIF1Q9H611 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PIF1Q9H611 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.54■□□□□ 0.56
PIF1Q9H611 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 RARRES2P4-201ENST00000514074 484 ntBASIC18.54■□□□□ 0.56
PIF1Q9H611 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.54■□□□□ 0.56
PIF1Q9H611 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.54■□□□□ 0.56
PIF1Q9H611 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PIF1Q9H611 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PIF1Q9H611 AC104581.1-202ENST00000635932 2618 ntBASIC18.54■□□□□ 0.56
PIF1Q9H611 AL049812.1-201ENST00000432563 2267 ntBASIC18.54■□□□□ 0.56
PIF1Q9H611 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.54■□□□□ 0.56
PIF1Q9H611 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PIF1Q9H611 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.53■□□□□ 0.56
PIF1Q9H611 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.53■□□□□ 0.56
PIF1Q9H611 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PIF1Q9H611 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.53■□□□□ 0.56
PIF1Q9H611 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.53■□□□□ 0.56
PIF1Q9H611 HLA-G-202ENST00000376815 851 ntBASIC18.53■□□□□ 0.56
PIF1Q9H611 HLA-G-203ENST00000376818 1127 ntBASIC18.53■□□□□ 0.56
PIF1Q9H611 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PIF1Q9H611 KRT18P68-201ENST00000392293 1000 ntBASIC18.53■□□□□ 0.56
PIF1Q9H611 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.53■□□□□ 0.56
PIF1Q9H611 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
PIF1Q9H611 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.53■□□□□ 0.56
PIF1Q9H611 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.53■□□□□ 0.56
PIF1Q9H611 AL355472.2-201ENST00000422958 438 ntBASIC18.53■□□□□ 0.56
PIF1Q9H611 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.53■□□□□ 0.56
PIF1Q9H611 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.53■□□□□ 0.56
PIF1Q9H611 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
PIF1Q9H611 AL162412.1-201ENST00000567129 965 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms