Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 HCG11-201ENST00000411553 5696 ntBASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR2J3Q9H1A7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 AC080038.1-201ENST00000611274 1154 ntBASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2J3Q9H1A7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 AC105036.2-201ENST00000569468 176 ntBASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 AC073111.5-205ENST00000641717 521 ntBASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR2J3Q9H1A7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.96■□□□□ 0.46
POLR2J3Q9H1A7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 AC005829.2-201ENST00000571422 1056 ntBASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 TFP1-202ENST00000475455 1573 ntBASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLR2J3Q9H1A7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms