Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 SERPINH1P1-201ENST00000419794 1249 ntBASIC11.58□□□□□ -0.56
LIMD2Q9BT23 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 UQCRFS1P1-201ENST00000435169 820 ntBASIC11.58□□□□□ -0.56
LIMD2Q9BT23 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 CNN2P6-201ENST00000439038 900 ntBASIC11.58□□□□□ -0.56
LIMD2Q9BT23 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 KRT8P20-201ENST00000423953 1409 ntBASIC11.58□□□□□ -0.56
LIMD2Q9BT23 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 AL512408.1-201ENST00000569378 2000 ntBASIC11.57□□□□□ -0.56
LIMD2Q9BT23 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 CD37-204ENST00000535669 1674 ntTSL 2 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 LSM12P1-201ENST00000411836 588 ntBASIC11.57□□□□□ -0.56
LIMD2Q9BT23 AL512625.2-201ENST00000417533 625 ntBASIC11.57□□□□□ -0.56
LIMD2Q9BT23 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 AC022517.1-201ENST00000592429 346 ntBASIC11.57□□□□□ -0.56
LIMD2Q9BT23 AL031963.3-201ENST00000606441 850 ntBASIC11.57□□□□□ -0.56
LIMD2Q9BT23 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
LIMD2Q9BT23 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 AL162377.1-201ENST00000618844 1793 ntBASIC11.56□□□□□ -0.56
LIMD2Q9BT23 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 APTR-203ENST00000430801 583 ntTSL 5 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 PLLP-204ENST00000569059 665 ntTSL 3 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 STK25-205ENST00000405883 1904 ntTSL 2 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 NXN-202ENST00000537628 1340 ntTSL 3 BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LIMD2Q9BT23 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms