Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.21■□□□□ 0.19
GAFA1Q96PS6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
GAFA1Q96PS6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 UBE2SP1-201ENST00000450587 669 ntBASIC16.2■□□□□ 0.18
GAFA1Q96PS6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GAFA1Q96PS6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 RARRES2P10-201ENST00000564312 460 ntBASIC16.19■□□□□ 0.18
GAFA1Q96PS6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 ZNF815P-204ENST00000434898 1737 ntBASIC16.19■□□□□ 0.18
GAFA1Q96PS6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GAFA1Q96PS6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.18■□□□□ 0.18
GAFA1Q96PS6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 HLA-A-209ENST00000638375 975 ntBASIC16.18■□□□□ 0.18
GAFA1Q96PS6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.18■□□□□ 0.18
GAFA1Q96PS6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
GAFA1Q96PS6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms