Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 AC020907.5-201ENST00000624372 1936 ntBASIC20.71■□□□□ 0.91
ZNF558Q96NG5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF558Q96NG5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.7■□□□□ 0.91
ZNF558Q96NG5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 KRT8P41-201ENST00000533985 1514 ntBASIC20.7■□□□□ 0.9
ZNF558Q96NG5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 HOMER2P1-201ENST00000455653 964 ntBASIC20.7■□□□□ 0.9
ZNF558Q96NG5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 AC140113.3-201ENST00000605663 199 ntBASIC20.7■□□□□ 0.9
ZNF558Q96NG5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNF558Q96NG5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 AP000550.4-202ENST00000639755 178 ntBASIC20.69■□□□□ 0.9
ZNF558Q96NG5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF558Q96NG5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 AP003041.3-201ENST00000527151 707 ntBASIC20.68■□□□□ 0.9
ZNF558Q96NG5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF558Q96NG5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF558Q96NG5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms