Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS50Q96JG6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VPS50Q96JG6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS50Q96JG6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS50Q96JG6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
VPS50Q96JG6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS50Q96JG6 AL158047.1-201ENST00000445918 881 ntBASIC18.99■□□□□ 0.63
VPS50Q96JG6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.99■□□□□ 0.63
VPS50Q96JG6 AC093827.2-201ENST00000512654 315 ntBASIC18.99■□□□□ 0.63
VPS50Q96JG6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.99■□□□□ 0.63
VPS50Q96JG6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.99■□□□□ 0.63
VPS50Q96JG6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.99■□□□□ 0.63
VPS50Q96JG6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.99■□□□□ 0.63
VPS50Q96JG6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS50Q96JG6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS50Q96JG6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS50Q96JG6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS50Q96JG6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS50Q96JG6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VPS50Q96JG6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.98■□□□□ 0.63
VPS50Q96JG6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
VPS50Q96JG6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VPS50Q96JG6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS50Q96JG6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VPS50Q96JG6 UBE2SP1-201ENST00000450587 669 ntBASIC18.98■□□□□ 0.63
VPS50Q96JG6 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.98■□□□□ 0.63
VPS50Q96JG6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS50Q96JG6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VPS50Q96JG6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS50Q96JG6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.98■□□□□ 0.63
VPS50Q96JG6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.98■□□□□ 0.63
VPS50Q96JG6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS50Q96JG6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS50Q96JG6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS50Q96JG6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS50Q96JG6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS50Q96JG6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS50Q96JG6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
VPS50Q96JG6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS50Q96JG6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS50Q96JG6 POM121L13P-201ENST00000422362 380 ntBASIC18.97■□□□□ 0.63
VPS50Q96JG6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS50Q96JG6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS50Q96JG6 FAM197Y4-202ENST00000622692 608 ntBASIC18.97■□□□□ 0.63
VPS50Q96JG6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS50Q96JG6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
VPS50Q96JG6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS50Q96JG6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS50Q96JG6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 AC008403.3-201ENST00000598924 454 ntBASIC18.96■□□□□ 0.63
VPS50Q96JG6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 AC005082.1-201ENST00000413042 2259 ntBASIC18.96■□□□□ 0.63
VPS50Q96JG6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS50Q96JG6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.96■□□□□ 0.63
VPS50Q96JG6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VPS50Q96JG6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS50Q96JG6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS50Q96JG6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS50Q96JG6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS50Q96JG6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
VPS50Q96JG6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS50Q96JG6 AC098590.1-201ENST00000468126 897 ntBASIC18.95■□□□□ 0.62
VPS50Q96JG6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.95■□□□□ 0.62
VPS50Q96JG6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS50Q96JG6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms