Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 AC090192.1-201ENST00000517740 490 ntBASIC20.57■□□□□ 0.88
TRIM11Q96F44 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM11Q96F44 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM11Q96F44 LINC01465-201ENST00000408887 1940 ntBASIC20.57■□□□□ 0.88
TRIM11Q96F44 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 AP000974.1-201ENST00000623909 2387 ntBASIC20.56■□□□□ 0.88
TRIM11Q96F44 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM11Q96F44 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRIM11Q96F44 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM11Q96F44 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM11Q96F44 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.56■□□□□ 0.88
TRIM11Q96F44 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM11Q96F44 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TRIM11Q96F44 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRIM11Q96F44 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM11Q96F44 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.55■□□□□ 0.88
TRIM11Q96F44 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 KRT18P16-201ENST00000510337 1294 ntBASIC20.55■□□□□ 0.88
TRIM11Q96F44 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 AC087289.5-201ENST00000586076 3175 ntBASIC20.55■□□□□ 0.88
TRIM11Q96F44 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM11Q96F44 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM11Q96F44 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM11Q96F44 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRIM11Q96F44 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM11Q96F44 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM11Q96F44 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM11Q96F44 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRIM11Q96F44 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM11Q96F44 UNC93B4-201ENST00000505679 747 ntBASIC20.54■□□□□ 0.88
TRIM11Q96F44 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM11Q96F44 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM11Q96F44 AC098818.2-201ENST00000564925 2320 ntBASIC20.54■□□□□ 0.88
TRIM11Q96F44 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM11Q96F44 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms