Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 RARRES2P10-201ENST00000564312 460 ntBASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.07■□□□□ 0.48
CTHRC1Q96CG8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 AL032819.2-201ENST00000624543 2162 ntBASIC18.06■□□□□ 0.48
CTHRC1Q96CG8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 HTR7P1-201ENST00000538670 1336 ntBASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 FAM197Y4-202ENST00000622692 608 ntBASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 SDHAP1-207ENST00000440850 2000 ntBASIC18.05■□□□□ 0.48
CTHRC1Q96CG8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 NIFKP9-201ENST00000419265 221 ntBASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 UBE2SP1-201ENST00000450587 669 ntBASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 AC066615.1-201ENST00000640911 628 ntBASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.04■□□□□ 0.48
CTHRC1Q96CG8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTHRC1Q96CG8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms