Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPNE4Q96A23 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE4Q96A23 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE4Q96A23 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CPNE4Q96A23 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CPNE4Q96A23 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE4Q96A23 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CPNE4Q96A23 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE4Q96A23 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE4Q96A23 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 AF186192.3-201ENST00000583427 947 ntBASIC17.47■□□□□ 0.39
CPNE4Q96A23 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CPNE4Q96A23 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE4Q96A23 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 NIFKP9-201ENST00000419265 221 ntBASIC17.46■□□□□ 0.39
CPNE4Q96A23 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 AC138932.1-201ENST00000534164 6830 ntBASIC17.46■□□□□ 0.39
CPNE4Q96A23 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE4Q96A23 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CPNE4Q96A23 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.46■□□□□ 0.38
CPNE4Q96A23 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE4Q96A23 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE4Q96A23 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE4Q96A23 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.45■□□□□ 0.38
CPNE4Q96A23 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.45■□□□□ 0.38
CPNE4Q96A23 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPNE4Q96A23 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms