Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
HPS1Q92902 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HPS1Q92902 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HPS1Q92902 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.7■□□□□ 0.42
HPS1Q92902 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HPS1Q92902 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
HPS1Q92902 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.7■□□□□ 0.42
HPS1Q92902 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.7■□□□□ 0.42
HPS1Q92902 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.7■□□□□ 0.42
HPS1Q92902 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.7■□□□□ 0.42
HPS1Q92902 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.7■□□□□ 0.42
HPS1Q92902 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.7■□□□□ 0.42
HPS1Q92902 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.7■□□□□ 0.42
HPS1Q92902 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.7■□□□□ 0.42
HPS1Q92902 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.7■□□□□ 0.42
HPS1Q92902 AC013268.1-206ENST00000638368 961 ntBASIC17.7■□□□□ 0.42
HPS1Q92902 AC112229.1-201ENST00000639295 961 ntBASIC17.7■□□□□ 0.42
HPS1Q92902 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HPS1Q92902 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.7■□□□□ 0.42
HPS1Q92902 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HPS1Q92902 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.7■□□□□ 0.42
HPS1Q92902 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HPS1Q92902 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS1Q92902 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HPS1Q92902 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HPS1Q92902 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.7■□□□□ 0.42
HPS1Q92902 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HPS1Q92902 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.69■□□□□ 0.42
HPS1Q92902 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.69■□□□□ 0.42
HPS1Q92902 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
HPS1Q92902 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
HPS1Q92902 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.69■□□□□ 0.42
HPS1Q92902 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.69■□□□□ 0.42
HPS1Q92902 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.69■□□□□ 0.42
HPS1Q92902 CD99P1-205ENST00000527459 561 ntBASIC17.69■□□□□ 0.42
HPS1Q92902 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HPS1Q92902 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HPS1Q92902 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.69■□□□□ 0.42
HPS1Q92902 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.69■□□□□ 0.42
HPS1Q92902 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.69■□□□□ 0.42
HPS1Q92902 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HPS1Q92902 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.69■□□□□ 0.42
HPS1Q92902 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HPS1Q92902 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HPS1Q92902 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HPS1Q92902 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.69■□□□□ 0.42
HPS1Q92902 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HPS1Q92902 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HPS1Q92902 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.68■□□□□ 0.42
HPS1Q92902 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
HPS1Q92902 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HPS1Q92902 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms