Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX1Q92499 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX1Q92499 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
DDX1Q92499 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX1Q92499 SNORA78-201ENST00000459373 127 ntBASIC20.75■□□□□ 0.91
DDX1Q92499 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX1Q92499 KRT18P16-201ENST00000510337 1294 ntBASIC20.75■□□□□ 0.91
DDX1Q92499 RPPH1-201ENST00000516869 333 ntBASIC20.75■□□□□ 0.91
DDX1Q92499 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX1Q92499 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.75■□□□□ 0.91
DDX1Q92499 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX1Q92499 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX1Q92499 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX1Q92499 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX1Q92499 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
DDX1Q92499 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
DDX1Q92499 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX1Q92499 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX1Q92499 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX1Q92499 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX1Q92499 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DDX1Q92499 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DDX1Q92499 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.74■□□□□ 0.91
DDX1Q92499 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DDX1Q92499 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX1Q92499 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.74■□□□□ 0.91
DDX1Q92499 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DDX1Q92499 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.74■□□□□ 0.91
DDX1Q92499 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX1Q92499 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX1Q92499 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DDX1Q92499 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX1Q92499 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.73■□□□□ 0.91
DDX1Q92499 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.73■□□□□ 0.91
DDX1Q92499 AC233263.1-201ENST00000578059 224 ntBASIC20.73■□□□□ 0.91
DDX1Q92499 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX1Q92499 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX1Q92499 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX1Q92499 ZNF815P-204ENST00000434898 1737 ntBASIC20.73■□□□□ 0.91
DDX1Q92499 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 KRT8P8-201ENST00000434750 1448 ntBASIC20.72■□□□□ 0.91
DDX1Q92499 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
DDX1Q92499 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.72■□□□□ 0.91
DDX1Q92499 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.72■□□□□ 0.91
DDX1Q92499 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 C1QBPP2-201ENST00000528754 825 ntBASIC20.72■□□□□ 0.91
DDX1Q92499 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.72■□□□□ 0.91
DDX1Q92499 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
DDX1Q92499 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.72■□□□□ 0.91
DDX1Q92499 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX1Q92499 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX1Q92499 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX1Q92499 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
DDX1Q92499 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX1Q92499 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX1Q92499 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
DDX1Q92499 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX1Q92499 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms