Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF139Q8WU17 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RNF139Q8WU17 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF139Q8WU17 AP002982.1-201ENST00000492365 877 ntBASIC20.46■□□□□ 0.87
RNF139Q8WU17 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.46■□□□□ 0.87
RNF139Q8WU17 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF139Q8WU17 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF139Q8WU17 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF139Q8WU17 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RNF139Q8WU17 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF139Q8WU17 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF139Q8WU17 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF139Q8WU17 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF139Q8WU17 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF139Q8WU17 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF139Q8WU17 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF139Q8WU17 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RNF139Q8WU17 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF139Q8WU17 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF139Q8WU17 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.45■□□□□ 0.86
RNF139Q8WU17 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF139Q8WU17 AC233702.5-201ENST00000584107 538 ntBASIC20.45■□□□□ 0.86
RNF139Q8WU17 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF139Q8WU17 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF139Q8WU17 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF139Q8WU17 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF139Q8WU17 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF139Q8WU17 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
RNF139Q8WU17 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF139Q8WU17 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
RNF139Q8WU17 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF139Q8WU17 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
RNF139Q8WU17 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF139Q8WU17 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RNF139Q8WU17 AF186192.3-201ENST00000583427 947 ntBASIC20.44■□□□□ 0.86
RNF139Q8WU17 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RNF139Q8WU17 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RNF139Q8WU17 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF139Q8WU17 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF139Q8WU17 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 AL049637.2-201ENST00000641778 930 ntBASIC20.43■□□□□ 0.86
RNF139Q8WU17 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF139Q8WU17 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF139Q8WU17 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF139Q8WU17 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF139Q8WU17 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 C1QL1P1-201ENST00000568105 661 ntBASIC20.42■□□□□ 0.86
RNF139Q8WU17 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF139Q8WU17 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF139Q8WU17 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF139Q8WU17 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF139Q8WU17 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RNF139Q8WU17 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF139Q8WU17 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF139Q8WU17 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF139Q8WU17 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms