Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 KRT18P16-201ENST00000510337 1294 ntBASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 AC104417.2-201ENST00000562989 1793 ntBASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHROOM3Q8TF72 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 NUDT16P1-203ENST00000513809 620 ntBASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHROOM3Q8TF72 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 AC110285.5-201ENST00000611501 352 ntBASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHROOM3Q8TF72 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 AC012618.2-201ENST00000428058 849 ntBASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 AC004264.1-201ENST00000608354 794 ntBASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 AC005332.7-201ENST00000614046 2005 ntBASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHROOM3Q8TF72 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHROOM3Q8TF72 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHROOM3Q8TF72 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
SHROOM3Q8TF72 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SHROOM3Q8TF72 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms