Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.77■■□□□ 1.4
SNED1Q8TER0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC23.77■■□□□ 1.4
SNED1Q8TER0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.77■■□□□ 1.4
SNED1Q8TER0 NPAP1P7-201ENST00000613027 823 ntBASIC23.77■■□□□ 1.4
SNED1Q8TER0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC23.77■■□□□ 1.4
SNED1Q8TER0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.77■■□□□ 1.4
SNED1Q8TER0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SNED1Q8TER0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNED1Q8TER0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.77■■□□□ 1.4
SNED1Q8TER0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 TSPY21P-201ENST00000433481 731 ntBASIC23.76■■□□□ 1.39
SNED1Q8TER0 TSPY23P-201ENST00000440136 739 ntBASIC23.76■■□□□ 1.39
SNED1Q8TER0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 LINC01465-201ENST00000408887 1940 ntBASIC23.76■■□□□ 1.39
SNED1Q8TER0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 ZNF444P1-201ENST00000559497 298 ntBASIC23.76■■□□□ 1.39
SNED1Q8TER0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNED1Q8TER0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.76■■□□□ 1.39
SNED1Q8TER0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SNED1Q8TER0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.75■■□□□ 1.39
SNED1Q8TER0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNED1Q8TER0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.75■■□□□ 1.39
SNED1Q8TER0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNED1Q8TER0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNED1Q8TER0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNED1Q8TER0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SNED1Q8TER0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNED1Q8TER0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.75■■□□□ 1.39
SNED1Q8TER0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNED1Q8TER0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.75■■□□□ 1.39
SNED1Q8TER0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SNED1Q8TER0 STARP1-201ENST00000397973 869 ntBASIC23.75■■□□□ 1.39
SNED1Q8TER0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.75■■□□□ 1.39
SNED1Q8TER0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.75■■□□□ 1.39
SNED1Q8TER0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SNED1Q8TER0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SNED1Q8TER0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SNED1Q8TER0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNED1Q8TER0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNED1Q8TER0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNED1Q8TER0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNED1Q8TER0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNED1Q8TER0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNED1Q8TER0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNED1Q8TER0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNED1Q8TER0 AP000523.1-201ENST00000398242 1049 ntBASIC23.74■■□□□ 1.39
SNED1Q8TER0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.74■■□□□ 1.39
SNED1Q8TER0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNED1Q8TER0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 NEK4P2-201ENST00000580004 1012 ntBASIC23.74■■□□□ 1.39
SNED1Q8TER0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.74■■□□□ 1.39
SNED1Q8TER0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.74■■□□□ 1.39
SNED1Q8TER0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SNED1Q8TER0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SNED1Q8TER0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SNED1Q8TER0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.73■■□□□ 1.39
SNED1Q8TER0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SNED1Q8TER0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SNED1Q8TER0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.73■■□□□ 1.39
SNED1Q8TER0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms