Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 AC005829.2-201ENST00000571422 1056 ntBASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 TFP1-202ENST00000475455 1573 ntBASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLHC1Q8NHS4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 GUSBP6-202ENST00000438529 1198 ntBASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLHC1Q8NHS4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLHC1Q8NHS4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.64■□□□□ 0.58
CLHC1Q8NHS4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 SLC29A4P1-201ENST00000398760 971 ntBASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 AC091874.3-201ENST00000512672 1195 ntBASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 AC092118.2-201ENST00000613495 667 ntBASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLHC1Q8NHS4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLHC1Q8NHS4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms