Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUP43Q8NFH3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NUP43Q8NFH3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NUP43Q8NFH3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NUP43Q8NFH3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 KRT18P6-201ENST00000555540 1265 ntBASIC18.21■□□□□ 0.51
NUP43Q8NFH3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NUP43Q8NFH3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NUP43Q8NFH3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.21■□□□□ 0.5
NUP43Q8NFH3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 AP003097.1-201ENST00000530657 1135 ntBASIC18.2■□□□□ 0.5
NUP43Q8NFH3 PRKY-204ENST00000533551 1019 ntBASIC18.2■□□□□ 0.5
NUP43Q8NFH3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP43Q8NFH3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 KRT8P8-201ENST00000434750 1448 ntBASIC18.19■□□□□ 0.5
NUP43Q8NFH3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.19■□□□□ 0.5
NUP43Q8NFH3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 KRT17P3-201ENST00000420566 1262 ntBASIC18.18■□□□□ 0.5
NUP43Q8NFH3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 TUBB8P6-201ENST00000436895 1288 ntBASIC18.18■□□□□ 0.5
NUP43Q8NFH3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 AC026366.1-201ENST00000488803 879 ntBASIC18.18■□□□□ 0.5
NUP43Q8NFH3 KRT18P16-201ENST00000510337 1294 ntBASIC18.18■□□□□ 0.5
NUP43Q8NFH3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms