Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIPK4Q8NE63 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 BCL2-203ENST00000589955 5011 ntBASIC18.85■□□□□ 0.61
HIPK4Q8NE63 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIPK4Q8NE63 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 PCDHB18P-201ENST00000524813 2368 ntBASIC18.84■□□□□ 0.61
HIPK4Q8NE63 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 AC097381.1-201ENST00000429019 1296 ntBASIC18.84■□□□□ 0.61
HIPK4Q8NE63 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.84■□□□□ 0.61
HIPK4Q8NE63 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIPK4Q8NE63 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.83■□□□□ 0.61
HIPK4Q8NE63 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
HIPK4Q8NE63 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIPK4Q8NE63 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIPK4Q8NE63 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
HIPK4Q8NE63 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.83■□□□□ 0.61
HIPK4Q8NE63 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HIPK4Q8NE63 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.83■□□□□ 0.61
HIPK4Q8NE63 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 AL390961.4-201ENST00000623958 2535 ntBASIC18.83■□□□□ 0.6
HIPK4Q8NE63 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.83■□□□□ 0.6
HIPK4Q8NE63 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIPK4Q8NE63 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms