Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM35BQ8NCS4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 MIR4651-201ENST00000582622 73 ntBASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 AC006058.3-201ENST00000606217 1069 ntBASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35BQ8NCS4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 POU5F1P3-201ENST00000428824 1078 ntBASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 ZNF815P-204ENST00000434898 1737 ntBASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEM35BQ8NCS4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 AC004264.1-201ENST00000608354 794 ntBASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 AC073648.6-201ENST00000641589 218 ntBASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35BQ8NCS4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35BQ8NCS4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms