Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.99■□□□□ 0.79
RTL3Q8N8U3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 AL353807.1-201ENST00000427475 662 ntBASIC19.98■□□□□ 0.79
RTL3Q8N8U3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RTL3Q8N8U3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 AL353708.3-201ENST00000610272 989 ntBASIC19.97■□□□□ 0.79
RTL3Q8N8U3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.97■□□□□ 0.79
RTL3Q8N8U3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTL3Q8N8U3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 AL135905.2-201ENST00000584934 1404 ntBASIC19.96■□□□□ 0.79
RTL3Q8N8U3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 HLA-A-209ENST00000638375 975 ntBASIC19.96■□□□□ 0.79
RTL3Q8N8U3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RTL3Q8N8U3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
RTL3Q8N8U3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 NIFKP9-201ENST00000419265 221 ntBASIC19.95■□□□□ 0.78
RTL3Q8N8U3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 AP002982.1-201ENST00000492365 877 ntBASIC19.95■□□□□ 0.78
RTL3Q8N8U3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 AF186192.3-201ENST00000583427 947 ntBASIC19.95■□□□□ 0.78
RTL3Q8N8U3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL3Q8N8U3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms