Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAM1L1Q8N609 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 FAM197Y1-201ENST00000421178 764 ntBASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 CD177P1-201ENST00000606252 935 ntBASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 CR392000.1-201ENST00000624770 1228 ntBASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAM1L1Q8N609 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.27■□□□□ 0.67
TRAM1L1Q8N609 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.27■□□□□ 0.67
TRAM1L1Q8N609 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.27■□□□□ 0.67
TRAM1L1Q8N609 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 AFG3L1P-217ENST00000557444 2447 ntBASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAM1L1Q8N609 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 AC131212.4-201ENST00000623606 975 ntBASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 ZNF815P-204ENST00000434898 1737 ntBASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAM1L1Q8N609 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 AC004980.1-204ENST00000429707 299 ntBASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 SNORA78-201ENST00000459373 127 ntBASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 MIR4497-201ENST00000583208 89 ntBASIC19.24■□□□□ 0.67
TRAM1L1Q8N609 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms