Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
COL27A1Q8IZC6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 HOMER2P1-201ENST00000455653 964 ntBASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 AL691432.2-201ENST00000607222 2038 ntBASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COL27A1Q8IZC6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL27A1Q8IZC6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 AP000523.1-201ENST00000398242 1049 ntBASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 AL512604.3-201ENST00000569583 964 ntBASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 AC012313.10-201ENST00000623509 926 ntBASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
COL27A1Q8IZC6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 AC073314.1-201ENST00000568729 2216 ntBASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 TSPY21P-201ENST00000433481 731 ntBASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 TSPY23P-201ENST00000440136 739 ntBASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 PRSS44-201ENST00000515154 1146 ntBASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.39■□□□□ 0.53
COL27A1Q8IZC6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 HBZP1-201ENST00000354915 429 ntBASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 KRT126P-201ENST00000549467 1181 ntBASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
COL27A1Q8IZC6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 AL450487.1-201ENST00000426799 995 ntBASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.37■□□□□ 0.53
COL27A1Q8IZC6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms