Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM48Q8IWZ4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 C1QL1P1-201ENST00000568105 661 ntBASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 AC026471.5-201ENST00000615068 467 ntBASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 CR392000.1-201ENST00000624770 1228 ntBASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 LINC01006-201ENST00000333319 2292 ntBASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM48Q8IWZ4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM48Q8IWZ4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.08■□□□□ 0.65
TRIM48Q8IWZ4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.08■□□□□ 0.65
TRIM48Q8IWZ4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM48Q8IWZ4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
TRIM48Q8IWZ4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM48Q8IWZ4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM48Q8IWZ4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM48Q8IWZ4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM48Q8IWZ4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 NIFKP9-201ENST00000419265 221 ntBASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 KSR1P1-201ENST00000446298 240 ntBASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 AL162377.1-201ENST00000618844 1793 ntBASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM48Q8IWZ4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 KRT16P1-201ENST00000399124 1418 ntBASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRIM48Q8IWZ4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 AL691432.2-201ENST00000607222 2038 ntBASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM48Q8IWZ4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms