Protein–RNA interactions for Protein: Q8IWD4

CCDC117, Coiled-coil domain-containing protein 117, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117Q8IWD4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC117Q8IWD4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC117Q8IWD4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC117Q8IWD4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC117Q8IWD4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC117Q8IWD4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 AC112907.3-201ENST00000577781 2400 ntBASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 MIR4497-201ENST00000583208 89 ntBASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 AP001271.2-201ENST00000624018 1556 ntBASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 KRT17P2-201ENST00000300992 1314 ntBASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 AL391422.3-201ENST00000603791 2761 ntBASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC117Q8IWD4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 TUBB8P6-201ENST00000436895 1288 ntBASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 SNORA78-201ENST00000459373 127 ntBASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 AL049637.2-201ENST00000641778 930 ntBASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC117Q8IWD4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 TMEM179-206ENST00000616017 1645 ntBASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 AL596275.1-201ENST00000423464 877 ntBASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC117Q8IWD4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 AF186192.3-201ENST00000583427 947 ntBASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC117Q8IWD4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC117Q8IWD4 AL691432.2-201ENST00000607222 2038 ntBASIC20.19■□□□□ 0.82
CCDC117Q8IWD4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms