Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 AC060766.5-201ENST00000590539 871 ntBASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 AC104771.1-201ENST00000603335 964 ntBASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC00346Q8IVM7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LINC00346Q8IVM7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LINC00346Q8IVM7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LINC00346Q8IVM7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
LINC00346Q8IVM7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.21■□□□□ 0.34
LINC00346Q8IVM7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.21■□□□□ 0.34
LINC00346Q8IVM7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.21■□□□□ 0.34
LINC00346Q8IVM7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LINC00346Q8IVM7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 RNF165-205ENST00000588679 2904 ntBASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC00346Q8IVM7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 AC069152.1-201ENST00000438030 544 ntBASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 SOX15-203ENST00000570788 1093 ntBASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00346Q8IVM7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 AC020763.4-201ENST00000623414 4170 ntBASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00346Q8IVM7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms