Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS13CQ709C8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VPS13CQ709C8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS13CQ709C8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS13CQ709C8 AL691432.2-201ENST00000607222 2038 ntBASIC16.28■□□□□ 0.2
VPS13CQ709C8 AC004951.3-201ENST00000418645 1148 ntBASIC16.28■□□□□ 0.2
VPS13CQ709C8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS13CQ709C8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS13CQ709C8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS13CQ709C8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS13CQ709C8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS13CQ709C8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VPS13CQ709C8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS13CQ709C8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.28■□□□□ 0.2
VPS13CQ709C8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS13CQ709C8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS13CQ709C8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS13CQ709C8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS13CQ709C8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS13CQ709C8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS13CQ709C8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.27■□□□□ 0.2
VPS13CQ709C8 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.27■□□□□ 0.2
VPS13CQ709C8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS13CQ709C8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VPS13CQ709C8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.27■□□□□ 0.2
VPS13CQ709C8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
VPS13CQ709C8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.27■□□□□ 0.2
VPS13CQ709C8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.27■□□□□ 0.2
VPS13CQ709C8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS13CQ709C8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
VPS13CQ709C8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS13CQ709C8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS13CQ709C8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS13CQ709C8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS13CQ709C8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.27■□□□□ 0.2
VPS13CQ709C8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
VPS13CQ709C8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VPS13CQ709C8 AC092119.3-201ENST00000612618 583 ntBASIC16.27■□□□□ 0.2
VPS13CQ709C8 NPAP1P7-201ENST00000613027 823 ntBASIC16.27■□□□□ 0.2
VPS13CQ709C8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
VPS13CQ709C8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.27■□□□□ 0.19
VPS13CQ709C8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VPS13CQ709C8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS13CQ709C8 HLA-G-202ENST00000376815 851 ntBASIC16.26■□□□□ 0.19
VPS13CQ709C8 HLA-G-203ENST00000376818 1127 ntBASIC16.26■□□□□ 0.19
VPS13CQ709C8 AC104692.2-201ENST00000603054 253 ntBASIC16.26■□□□□ 0.19
VPS13CQ709C8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS13CQ709C8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS13CQ709C8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS13CQ709C8 AP000523.1-201ENST00000398242 1049 ntBASIC16.26■□□□□ 0.19
VPS13CQ709C8 PRSS44-201ENST00000515154 1146 ntBASIC16.26■□□□□ 0.19
VPS13CQ709C8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.26■□□□□ 0.19
VPS13CQ709C8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS13CQ709C8 NEK4P2-201ENST00000580004 1012 ntBASIC16.26■□□□□ 0.19
VPS13CQ709C8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS13CQ709C8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS13CQ709C8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
VPS13CQ709C8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS13CQ709C8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VPS13CQ709C8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.26■□□□□ 0.19
VPS13CQ709C8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS13CQ709C8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VPS13CQ709C8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
VPS13CQ709C8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS13CQ709C8 KRT8P41-201ENST00000533985 1514 ntBASIC16.25■□□□□ 0.19
VPS13CQ709C8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13CQ709C8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS13CQ709C8 UNC93B7-201ENST00000509439 705 ntBASIC16.25■□□□□ 0.19
VPS13CQ709C8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13CQ709C8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13CQ709C8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS13CQ709C8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13CQ709C8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13CQ709C8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13CQ709C8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13CQ709C8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS13CQ709C8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13CQ709C8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13CQ709C8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS13CQ709C8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
VPS13CQ709C8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13CQ709C8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13CQ709C8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 AL353719.1-201ENST00000566847 864 ntBASIC16.24■□□□□ 0.19
VPS13CQ709C8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13CQ709C8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 AC011298.2-201ENST00000617989 482 ntBASIC16.24■□□□□ 0.19
VPS13CQ709C8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13CQ709C8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13CQ709C8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS13CQ709C8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS13CQ709C8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms