Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRPF38BQ5VTL8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 AC074051.2-201ENST00000565115 352 ntBASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 KRT18P28-201ENST00000453838 1332 ntBASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PRPF38BQ5VTL8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 AC009065.1-201ENST00000564055 1225 ntBASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.16■□□□□ 0.98
PRPF38BQ5VTL8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 DNAJB3-201ENST00000446806 729 ntBASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 Z85996.1-201ENST00000494644 937 ntBASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 AC099336.1-202ENST00000602961 463 ntBASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.15■□□□□ 0.98
PRPF38BQ5VTL8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PRPF38BQ5VTL8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF38BQ5VTL8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF38BQ5VTL8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRPF38BQ5VTL8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 AC112482.1-201ENST00000492080 688 ntBASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 AC139887.3-201ENST00000568585 713 ntBASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRPF38BQ5VTL8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRPF38BQ5VTL8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms